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B4GAT1 beta-1,4-glucuronyltransferase 1 [ Vicugna pacos (alpaca) ]

Gene ID: 102535854, updated on 10-Mar-2024

Summary

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Gene symbol
B4GAT1
Gene description
beta-1,4-glucuronyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Also known as
B3GNT1
Orthologs
human mouse all
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Genomic context

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See B4GAT1 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
2
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 25 Unlocalized Scaffold NW_021964207.1 (16175883..16178174, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882817.1 (293287..295605, complement)

NW_021964207.1Genomic Context describing neighboring genes Neighboring gene Ras and Rab interactor 1 Neighboring gene BRMS1 transcriptional repressor and anoikis regulator Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene solute carrier family 29 member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-glucuronyltransferase 1
Names
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964207.1 Reference VicPac3.1 Primary Assembly

    Range
    16175883..16178174 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006210660.2 → XP_006210722.1  beta-1,4-glucuronyltransferase 1

    See identical proteins and their annotated locations for XP_006210722.1

    UniProtKB/TrEMBL
    A0A6I9IF06
    Conserved Domains (1) summary
    pfam13896
    Location:94 → 408
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
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