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PIGL phosphatidylinositol glycan anchor biosynthesis class L [ Vicugna pacos (alpaca) ]

Gene ID: 102535781, updated on 10-Mar-2024

Summary

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Gene symbol
PIGL
Gene description
phosphatidylinositol glycan anchor biosynthesis class L
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See PIGL in Genome Data Viewer
Location:
chromosome: 16
Exon count:
7
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 16 Unlocalized Scaffold NW_021964191.1 (324161..367625, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882883.1 (2138024..2182593)

NW_021964191.1Genomic Context describing neighboring genes Neighboring gene ubiquitin B Neighboring gene centromere protein V Neighboring gene nuclear receptor corepressor 1 Neighboring gene tetratricopeptide repeat domain 19 Neighboring gene zinc finger SWIM-type containing 7 Neighboring gene adenosine A2b receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosaminylphosphatidylinositol deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964191.1 Reference VicPac3.1 Primary Assembly

    Range
    324161..367625 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006213833.3 → XP_006213895.2  LOW QUALITY PROTEIN: N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase

    UniProtKB/TrEMBL
    A0A6I9IJC1
    Conserved Domains (1) summary
    cl00929
    Location:42 → 252
    PIG-L; GlcNAc-PI de-N-acetylase
Nucleotide Protein
Heading Accession and Version

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