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MMADHC metabolism of cobalamin associated D [ Vicugna pacos (alpaca) ]

Gene ID: 102533687, updated on 10-Mar-2024

Summary

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Gene symbol
MMADHC
Gene description
metabolism of cobalamin associated D
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See MMADHC in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 5 Unlocalized Scaffold NW_021964164.1 (69201642..69214679)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882702.1 (27124107..27140036, complement)

NW_021964164.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116280641 Neighboring gene transfer RNA aspartic acid (anticodon AUC) Neighboring gene peroxiredoxin-5, mitochondrial-like Neighboring gene LY6/PLAUR domain containing 6 Neighboring gene uncharacterized LOC116280499

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D protein, mitochondrial
Names
methylmalonic aciduria and homocystinuria, cblD type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964164.1 Reference VicPac3.1 Primary Assembly

    Range
    69201642..69214679
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031677770.1 → XP_031533630.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial

    UniProtKB/TrEMBL
    A0A6J3AGS5
    Conserved Domains (1) summary
    pfam10229
    Location:70 → 339
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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