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EXTL3 exostosin like glycosyltransferase 3 [ Vicugna pacos (alpaca) ]

Gene ID: 102532676, updated on 10-Mar-2024

Summary

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Gene symbol
EXTL3
Gene description
exostosin like glycosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See EXTL3 in Genome Data Viewer
Location:
chromosome: 31
Exon count:
7
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 31 Unlocalized Scaffold NW_021964218.1 (7520509..7608560)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882739.1 (4328542..4363314, complement)

NW_021964218.1Genomic Context describing neighboring genes Neighboring gene F-box protein 16 Neighboring gene frizzled class receptor 3 Neighboring gene integrator complex subunit 9 Neighboring gene homeobox containing 1 Neighboring gene kinesin family member 13B Neighboring gene transfer RNA alanine (anticodon AGC)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964218.1 Reference VicPac3.1 Primary Assembly

    Range
    7520509..7608560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031692558.1 → XP_031548418.1  exostosin-like 3

    UniProtKB/TrEMBL
    A0A6J3BRS4
    Conserved Domains (3) summary
    pfam03016
    Location:190 → 500
    Exostosin; Exostosin family
    pfam07926
    Location:71 → 150
    TPR_MLP1_2; TPR/MLP1/MLP2-like protein
    pfam09258
    Location:663 → 900
    Glyco_transf_64; Glycosyl transferase family 64 domain

  2. XM_015238269.2 → XP_015093755.1  exostosin-like 3

    UniProtKB/TrEMBL
    A0A6J3BRS4
    Conserved Domains (3) summary
    pfam03016
    Location:190 → 500
    Exostosin; Exostosin family
    pfam07926
    Location:71 → 150
    TPR_MLP1_2; TPR/MLP1/MLP2-like protein
    pfam09258
    Location:663 → 900
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
Heading Accession and Version

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