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CACNA2D1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 [ Vicugna pacos (alpaca) ]

Gene ID: 102532132, updated on 10-Mar-2024

Summary

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Gene symbol
CACNA2D1
Gene description
calcium voltage-gated channel auxiliary subunit alpha2delta 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See CACNA2D1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
39
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 7 Unlocalized Scaffold NW_021964167.1 (16455314..16881468)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882841.1 (2522926..2921591)

NW_021964167.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S7 pseudogene Neighboring gene thymidine kinase, cytosolic pseudogene Neighboring gene 60S ribosomal protein L23a pseudogene Neighboring gene 5S ribosomal RNA Neighboring gene 60S ribosomal protein L6-like Neighboring gene signal recognition particle 14 kDa protein-like Neighboring gene signal recognition particle 14 kDa protein-like Neighboring gene hepatocyte growth factor Neighboring gene uncharacterized LOC116281310 Neighboring gene U2 spliceosomal RNA Neighboring gene semaphorin 3C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of L-type voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent calcium channel subunit alpha-2/delta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964167.1 Reference VicPac3.1 Primary Assembly

    Range
    16455314..16881468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031679721.1 → XP_031535581.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X9

    UniProtKB/TrEMBL
    A0A6J3ASJ8
    Conserved Domains (3) summary
    cd01463
    Location:239 → 417
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam08399
    Location:104 → 223
    VWA_N; VWA N-terminal
    pfam02743
    Location:437 → 526
    dCache_1; Cache domain

  2. XM_031679719.1 → XP_031535579.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X7

    UniProtKB/TrEMBL
    A0A6J3AP64
    Conserved Domains (4) summary
    cd01463
    Location:239 → 417
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam08399
    Location:104 → 223
    VWA_N; VWA N-terminal
    pfam08473
    Location:651 → 1008
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
    pfam02743
    Location:437 → 526
    dCache_1; Cache domain

  3. XM_031679714.1 → XP_031535574.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X2

    UniProtKB/TrEMBL
    A0A6J3AP60
    Conserved Domains (4) summary
    cd01463
    Location:239 → 417
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam08399
    Location:104 → 223
    VWA_N; VWA N-terminal
    pfam08473
    Location:646 → 1039
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
    pfam02743
    Location:437 → 617
    dCache_1; Cache domain

  4. XM_015245642.2 → XP_015101128.2  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1

    UniProtKB/TrEMBL
    A0A6J0AU63
    Conserved Domains (4) summary
    cd01463
    Location:239 → 417
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam08399
    Location:104 → 223
    VWA_N; VWA N-terminal
    pfam08473
    Location:651 → 1044
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
    pfam02743
    Location:437 → 526
    dCache_1; Cache domain

  5. XM_031679716.1 → XP_031535576.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X4

    UniProtKB/TrEMBL
    A0A6J3ASJ7
    Conserved Domains (4) summary
    cd01463
    Location:239 → 417
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam08399
    Location:104 → 223
    VWA_N; VWA N-terminal
    pfam08473
    Location:632 → 1025
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
    pfam02743
    Location:437 → 603
    dCache_1; Cache domain

  6. XM_031679717.1 → XP_031535577.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X5

    UniProtKB/TrEMBL
    A0A6J3AQU4
    Conserved Domains (4) summary
    cd01463
    Location:239 → 417
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam08399
    Location:104 → 223
    VWA_N; VWA N-terminal
    pfam08473
    Location:627 → 1020
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
    pfam02743
    Location:437 → 598
    dCache_1; Cache domain

  7. XM_031679715.1 → XP_031535575.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X3

    UniProtKB/TrEMBL
    A0A6J3AM35
    Conserved Domains (4) summary
    cd01463
    Location:239 → 417
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam08399
    Location:104 → 223
    VWA_N; VWA N-terminal
    pfam08473
    Location:644 → 1037
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
    pfam02743
    Location:437 → 526
    dCache_1; Cache domain

  8. XM_031679718.1 → XP_031535578.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X6

    UniProtKB/TrEMBL
    A0A6J3APW1
    Conserved Domains (4) summary
    cd01463
    Location:239 → 417
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam08399
    Location:104 → 223
    VWA_N; VWA N-terminal
    pfam08473
    Location:625 → 1018
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
    pfam02743
    Location:437 → 603
    dCache_1; Cache domain

  9. XM_031679720.1 → XP_031535580.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X8

    UniProtKB/TrEMBL
    A0A6J3AM39
    Conserved Domains (4) summary
    cd01463
    Location:239 → 417
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    cl38916
    Location:509 → 601
    HK_sensor; Sensor domains of Histidine Kinase receptors
    pfam08399
    Location:104 → 223
    VWA_N; VWA N-terminal
    pfam08473
    Location:620 → 1013
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd

RNA

  1. XR_004190733.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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