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ST8SIA5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [ Vicugna pacos (alpaca) ]

Gene ID: 102530591, updated on 10-Mar-2024

Summary

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Gene symbol
ST8SIA5
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See ST8SIA5 in Genome Data Viewer
Location:
chromosome: 30
Exon count:
8
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 30 Unlocalized Scaffold NW_021964215.1 (2076904..2128634, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882951.1 (96643..147939)

NW_021964215.1Genomic Context describing neighboring genes Neighboring gene arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C Neighboring gene lipoxygenase homology PLAT domains 1 Neighboring gene uncharacterized LOC107034751 Neighboring gene uncharacterized LOC116286061 Neighboring gene protein inhibitor of activated STAT 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: alpha-2,8-sialyltransferase 8E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964215.1 Reference VicPac3.1 Primary Assembly

    Range
    2076904..2128634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015249662.2 → XP_015105148.2  LOW QUALITY PROTEIN: alpha-2,8-sialyltransferase 8E

    UniProtKB/TrEMBL
    A0A6J0B1R7
    Conserved Domains (1) summary
    pfam00777
    Location:153 → 406
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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