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CPO carboxypeptidase O [ Vicugna pacos (alpaca) ]

Gene ID: 102530198, updated on 10-Mar-2024

Summary

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Gene symbol
CPO
Gene description
carboxypeptidase O
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See CPO in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 5 Unlocalized Scaffold NW_021964164.1 (31178750..31204993)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882751.1 (7604104..7629754)

NW_021964164.1Genomic Context describing neighboring genes Neighboring gene FAST kinase domains 2 Neighboring gene transfer RNA aspartic acid (anticodon AUC) Neighboring gene KLF transcription factor 7 Neighboring gene uncharacterized LOC116280579

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxypeptidase O

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964164.1 Reference VicPac3.1 Primary Assembly

    Range
    31178750..31204993
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006205222.2 → XP_006205284.1  carboxypeptidase O

    UniProtKB/TrEMBL
    A0A6I9I8I6
    Conserved Domains (1) summary
    cd06247
    Location:48 → 345
    M14_CPO; Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase O subgroup
Nucleotide Protein
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Gene LinkOut

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