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SLC25A20 solute carrier family 25 member 20 [ Vicugna pacos (alpaca) ]

Gene ID: 102529517, updated on 10-Mar-2024

Summary

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Gene symbol
SLC25A20
Gene description
solute carrier family 25 member 20
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See SLC25A20 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
9
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 17 Unlocalized Scaffold NW_021964193.1 (33372771..33398214)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882703.1 (490230..515671, complement)

NW_021964193.1Genomic Context describing neighboring genes Neighboring gene secreted frizzled-related protein 5-like Neighboring gene prolyl 4-hydroxylase, transmembrane Neighboring gene ariadne RBR E3 ubiquitin protein ligase 2 Neighboring gene ARIH2 opposite strand lncRNA Neighboring gene protein kinase cAMP-dependent type II regulatory subunit alpha Neighboring gene inositol hexakisphosphate kinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables low-density lipoprotein particle binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964193.1 Reference VicPac3.1 Primary Assembly

    Range
    33372771..33398214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006196278.2 → XP_006196340.1  mitochondrial carnitine/acylcarnitine carrier protein

    See identical proteins and their annotated locations for XP_006196340.1

    UniProtKB/TrEMBL
    A0A6I9HU73
    Conserved Domains (1) summary
    pfam00153
    Location:108 → 198
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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