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MSMO1 methylsterol monooxygenase 1 [ Vicugna pacos (alpaca) ]

Gene ID: 102528719, updated on 10-Mar-2024

Summary

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Gene symbol
MSMO1
Gene description
methylsterol monooxygenase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See MSMO1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 2 Unlocalized Scaffold NW_021964157.1 (113827514..113845701, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882870.1 (3801248..3819369, complement)

NW_021964157.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102532215 Neighboring gene carboxypeptidase E Neighboring gene kelch like family member 2 Neighboring gene putative tripartite motif-containing protein 75 Neighboring gene transmembrane protein 192

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-4 methylsterol oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylsterol monooxygenase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964157.1 Reference VicPac3.1 Primary Assembly

    Range
    113827514..113845701 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031670176.1 → XP_031526036.1  methylsterol monooxygenase 1

    UniProtKB/TrEMBL
    A0A6I9IIK8
    Conserved Domains (1) summary
    pfam04116
    Location:145 → 274
    FA_hydroxylase; Fatty acid hydroxylase superfamily

  2. XM_006213185.3 → XP_006213247.1  methylsterol monooxygenase 1

    UniProtKB/TrEMBL
    A0A6I9IIK8
    Conserved Domains (1) summary
    pfam04116
    Location:145 → 274
    FA_hydroxylase; Fatty acid hydroxylase superfamily
Nucleotide Protein
Heading Accession and Version

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