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CD14 CD14 molecule [ Vicugna pacos (alpaca) ]

Gene ID: 102528618, updated on 10-Mar-2024

Summary

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Gene symbol
CD14
Gene description
CD14 molecule
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See CD14 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 3 Unlocalized Scaffold NW_021964158.1 (8727274..8730193)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882746.1 (8704328..8707267)

NW_021964158.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase subunit A2 Neighboring gene 60S ribosomal protein L34 pseudogene Neighboring gene transmembrane and coiled-coil domains 6 Neighboring gene uncharacterized LOC102528876 Neighboring gene solute carrier family 35 member A4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipopolysaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipopolysaccharide-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of non-canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of type I interferon production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of type II interferon production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor 4 signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of lipopolysaccharide receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
monocyte differentiation antigen CD14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964158.1 Reference VicPac3.1 Primary Assembly

    Range
    8727274..8730193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015239485.2 → XP_015094971.1  monocyte differentiation antigen CD14

    UniProtKB/TrEMBL
    A0A6J0AL86
    Conserved Domains (2) summary
    PLN03210
    Location:191 → 335
    PLN03210; Resistant to P. syringae 6; Provisional
    sd00031
    Location:193 → 223
    LRR_1; leucine-rich repeat [structural motif]
Nucleotide Protein
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