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CRLS1 cardiolipin synthase 1 [ Vicugna pacos (alpaca) ]

Gene ID: 102528268, updated on 10-Mar-2024

Summary

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Gene symbol
CRLS1
Gene description
cardiolipin synthase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See CRLS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) Unplaced Scaffold NW_022038908.1 (3342550..3362188)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882770.1 (3388440..3408074)

NW_022038908.1Genomic Context describing neighboring genes Neighboring gene tRNA methyltransferase 6 non-catalytic subunit Neighboring gene minichromosome maintenance 8 homologous recombination repair factor Neighboring gene uncharacterized LOC107033819 Neighboring gene leucine rich repeat neuronal 4 Neighboring gene FERM domain containing kindlin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cardiolipin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cardiolipin synthase (CMP-forming)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_022038908.1 Reference VicPac3.1 Primary Assembly

    Range
    3342550..3362188
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006207371.2 → XP_006207433.1  cardiolipin synthase (CMP-forming)

    See identical proteins and their annotated locations for XP_006207433.1

    UniProtKB/TrEMBL
    A0A6I9IA51
    Conserved Domains (1) summary
    PLN02794
    Location:1 → 191
    PLN02794; cardiolipin synthase

  2. XM_015241851.2 → XP_015097337.1  cardiolipin synthase (CMP-forming)

    UniProtKB/TrEMBL
    A0A6I9IA51
    Conserved Domains (1) summary
    PLN02794
    Location:1 → 191
    PLN02794; cardiolipin synthase
Nucleotide Protein
Heading Accession and Version

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