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DERA deoxyribose-phosphate aldolase [ Vicugna pacos (alpaca) ]

Gene ID: 102526855, updated on 10-Mar-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: 34
Exon count:
9
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 34 Unlocalized Scaffold NW_021964223.1 (11679238..11755046, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882720.1 (3919776..3976385)

NW_021964223.1Genomic Context describing neighboring genes Neighboring gene transfer RNA valine (anticodon AAC) Neighboring gene transfer RNA alanine (anticodon GGC) Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORA23 Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene transfer RNA threonine (anticodon AGU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964223.1 Reference VicPac3.1 Primary Assembly

    Range
    11679238..11755046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031670522.1 → XP_031526382.1  deoxyribose-phosphate aldolase

    UniProtKB/TrEMBL
    A0A6J2ZZA4
    Conserved Domains (1) summary
    cd00959
    Location:88 → 315
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family
Nucleotide Protein
Heading Accession and Version

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