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PDHB pyruvate dehydrogenase E1 subunit beta [ Vicugna pacos (alpaca) ]

Gene ID: 102526467, updated on 11-Apr-2024

Summary

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Gene symbol
PDHB
Gene description
pyruvate dehydrogenase E1 subunit beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See PDHB in Genome Data Viewer
Location:
chromosome: 17
Exon count:
10
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 17 Unlocalized Scaffold NW_021964193.1 (26160887..26165517)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882703.1 (7736867..7741453, complement)

NW_021964193.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA oxidase 2 Neighboring gene potassium channel tetramerization domain containing 6 Neighboring gene PX domain containing serine/threonine kinase like Neighboring gene ribonuclease P/MRP subunit p14 Neighboring gene hydroxyacyl-thioester dehydratase type 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyruvate dehydrogenase (acetyl-transferring) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process from pyruvate IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyruvate dehydrogenase E1 component subunit beta, mitochondrial
Names
pyruvate dehydrogenase (lipoamide) beta
pyruvate dehydrogenase E1 beta subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964193.1 Reference VicPac3.1 Primary Assembly

    Range
    26160887..26165517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006196452.3 → XP_006196514.1  pyruvate dehydrogenase E1 component subunit beta, mitochondrial

    See identical proteins and their annotated locations for XP_006196514.1

    UniProtKB/TrEMBL
    A0A6I9HV50
    Conserved Domains (1) summary
    PRK11892
    Location:32 → 355
    PRK11892; pyruvate dehydrogenase subunit beta; Provisional
Nucleotide Protein
Heading Accession and Version

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