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MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102519257, updated on 10-Mar-2024

Summary

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Gene symbol
MDGA1
Gene description
MAM domain containing glycosylphosphatidylinositol anchor 1
See related
EnsemblRapid:ENSCFEG00005013510
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See MDGA1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
18
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 20 NC_045715.1 (25212129..25269011, complement)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210276.1 (597611..653524)

Chromosome 20 - NC_045715.1Genomic Context describing neighboring genes Neighboring gene cap methyltransferase 1 Neighboring gene coiled-coil domain containing 167 Neighboring gene zinc finger AN1-type containing 3 Neighboring gene uncharacterized LOC116658266 Neighboring gene small nuclear ribonucleoprotein G-like Neighboring gene uncharacterized LOC116658265

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables axon guidance receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAM domain-containing glycosylphosphatidylinositol anchor protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045715.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    25212129..25269011 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032462986.1 → XP_032318877.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B8RM10
    Conserved Domains (5) summary
    smart00410
    Location:248 → 326
    IG_like; Immunoglobulin like
    pfam00629
    Location:745 → 909
    MAM; MAM domain, meprin/A5/mu
    pfam13927
    Location:43 → 112
    Ig_3; Immunoglobulin domain
    cd00096
    Location:56 → 60
    Ig; Ig strand B [structural motif]
    cl11960
    Location:334 → 418
    Ig; Immunoglobulin domain

  2. XM_032462987.1 → XP_032318878.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8B8RLR4
    Conserved Domains (6) summary
    smart00408
    Location:254 → 315
    IGc2; Immunoglobulin C-2 Type
    smart00409
    Location:152 → 217
    IG; Immunoglobulin
    pfam00629
    Location:753 → 889
    MAM; MAM domain, meprin/A5/mu
    pfam13927
    Location:439 → 515
    Ig_3; Immunoglobulin domain
    cd00096
    Location:56 → 60
    Ig; Ig strand B [structural motif]
    cl11960
    Location:44 → 115
    Ig; Immunoglobulin domain

  3. XM_006173283.3 → XP_006173345.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B6Y652
    Related
    ENSCFEP00005022680.1, ENSCFET00005025239.1
    Conserved Domains (7) summary
    cd06263
    Location:753 → 916
    MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
    cd00096
    Location:153 → 217
    Ig; Immunoglobulin domain
    smart00408
    Location:254 → 315
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:248 → 326
    IG_like; Immunoglobulin like
    pfam07679
    Location:539 → 630
    I-set; Immunoglobulin I-set domain
    pfam00629
    Location:753 → 917
    MAM; MAM domain, meprin/A5/mu
    cl11960
    Location:541 → 622
    Ig; Immunoglobulin domain

  4. XM_032462989.1 → XP_032318880.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8B8RNH8
    Conserved Domains (5) summary
    smart00409
    Location:116 → 194
    IG; Immunoglobulin
    pfam00629
    Location:621 → 785
    MAM; MAM domain, meprin/A5/mu
    pfam13927
    Location:307 → 383
    Ig_3; Immunoglobulin domain
    cd00096
    Location:327 → 331
    Ig; Ig strand B [structural motif]
    cl11960
    Location:202 → 286
    Ig; Immunoglobulin domain
Nucleotide Protein
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