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NCK1 NCK adaptor protein 1 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102516504, updated on 10-Mar-2024

Summary

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Gene symbol
NCK1
Gene description
NCK adaptor protein 1
Locus tag
CB1_000314003
See related
EnsemblRapid:ENSCFEG00005002883
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See NCK1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 1 NC_045696.1 (107233227..107302189, complement)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210490.1 (428148..494408)

Chromosome 1 - NC_045696.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene interleukin 20 receptor subunit beta Neighboring gene uncharacterized LOC116666020 Neighboring gene solute carrier family 35 member G2 Neighboring gene STAG1 cohesin complex component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequences of wild and domestic bactrian camels. Bactrian Camels Genome Sequencing and Analysis Consortium, et al. Nat Commun, 2012. PMID 23149746, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of PERK-mediated unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of translation in response to endoplasmic reticulum stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic protein NCK1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045696.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    107233227..107302189 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032487942.1 → XP_032343833.1  cytoplasmic protein NCK1 isoform X3

    UniProtKB/TrEMBL
    A0A8B8TPQ1
    Related
    ENSCFEP00005004452.1, ENSCFET00005005098.1
    Conserved Domains (3) summary
    cd10408
    Location:216 → 312
    SH2_Nck1; Src homology 2 (SH2) domain found in Nck
    cd11901
    Location:44 → 98
    SH3_Nck1_2; Second Src Homology 3 domain of Nck1 adaptor protein
    cd11904
    Location:129 → 185
    SH3_Nck1_3; Third Src Homology 3 domain of Nck1 adaptor protein

  2. XM_032487925.1 → XP_032343816.1  cytoplasmic protein NCK1 isoform X2

    UniProtKB/TrEMBL
    S9XFB4
    Related
    ENSCFEP00005004439.1, ENSCFET00005005085.1
    Conserved Domains (4) summary
    cd10408
    Location:280 → 376
    SH2_Nck1; Src homology 2 (SH2) domain found in Nck
    cd11900
    Location:3 → 61
    SH3_Nck1_1; First Src Homology 3 domain of Nck1 adaptor protein
    cd11901
    Location:108 → 162
    SH3_Nck1_2; Second Src Homology 3 domain of Nck1 adaptor protein
    cd11904
    Location:193 → 249
    SH3_Nck1_3; Third Src Homology 3 domain of Nck1 adaptor protein

  3. XM_032487933.1 → XP_032343824.1  cytoplasmic protein NCK1 isoform X2

    UniProtKB/TrEMBL
    S9XFB4
    Conserved Domains (4) summary
    cd10408
    Location:280 → 376
    SH2_Nck1; Src homology 2 (SH2) domain found in Nck
    cd11900
    Location:3 → 61
    SH3_Nck1_1; First Src Homology 3 domain of Nck1 adaptor protein
    cd11901
    Location:108 → 162
    SH3_Nck1_2; Second Src Homology 3 domain of Nck1 adaptor protein
    cd11904
    Location:193 → 249
    SH3_Nck1_3; Third Src Homology 3 domain of Nck1 adaptor protein

  4. XM_006177455.3 → XP_006177517.2  cytoplasmic protein NCK1 isoform X1

    UniProtKB/TrEMBL
    A0A8B6YCQ5
    Conserved Domains (4) summary
    cd10408
    Location:295 → 391
    SH2_Nck1; Src homology 2 (SH2) domain found in Nck
    cd11900
    Location:18 → 76
    SH3_Nck1_1; First Src Homology 3 domain of Nck1 adaptor protein
    cd11901
    Location:123 → 177
    SH3_Nck1_2; Second Src Homology 3 domain of Nck1 adaptor protein
    cd11904
    Location:208 → 264
    SH3_Nck1_3; Third Src Homology 3 domain of Nck1 adaptor protein
Nucleotide Protein
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