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CHRNE cholinergic receptor nicotinic epsilon subunit [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102513246, updated on 10-Mar-2024

Summary

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Gene symbol
CHRNE
Gene description
cholinergic receptor nicotinic epsilon subunit
Locus tag
CB1_000489007
See related
EnsemblRapid:ENSCFEG00005008319
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See CHRNE in Genome Data Viewer
Location:
chromosome: 16
Exon count:
15
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 16 NC_045711.1 (11258304..11273404)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210665.1 (51454..53598)

Chromosome 16 - NC_045711.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 11 Neighboring gene glycoprotein Ib platelet subunit alpha Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene chromosome 16 C17orf107 homolog Neighboring gene misshapen like kinase 1 Neighboring gene phospholipase D2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit epsilon
Names
acetylcholine receptor subunit epsilon-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045711.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    11258304..11273404
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032498545.1 → XP_032354436.1  acetylcholine receptor subunit epsilon isoform X1

    UniProtKB/TrEMBL
    A0A8B8UIU8
    Conserved Domains (2) summary
    cl28912
    Location:79 → 278
    LGIC_ECD; extracellular domain (ECD) of Cys-loop neurotransmitter-gated ion channels (also known as ligand-gated ion channel (LGIC))
    pfam02932
    Location:286 → 513
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

  2. XM_032498546.1 → XP_032354437.1  acetylcholine receptor subunit epsilon isoform X2

    UniProtKB/TrEMBL
    A0A8B8UJ81
    Conserved Domains (2) summary
    cl28912
    Location:79 → 269
    LGIC_ECD; extracellular domain (ECD) of Cys-loop neurotransmitter-gated ion channels (also known as ligand-gated ion channel (LGIC))
    pfam02932
    Location:277 → 504
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

  3. XM_032498547.1 → XP_032354438.1  acetylcholine receptor subunit epsilon isoform X3

    UniProtKB/TrEMBL
    A0A8B8UJ66
    Conserved Domains (2) summary
    cl28912
    Location:49 → 248
    LGIC_ECD; extracellular domain (ECD) of Cys-loop neurotransmitter-gated ion channels (also known as ligand-gated ion channel (LGIC))
    pfam02932
    Location:256 → 483
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

  4. XM_032498548.1 → XP_032354439.1  acetylcholine receptor subunit epsilon isoform X4

    UniProtKB/TrEMBL
    A0A8B8UIQ6
    Related
    ENSCFEP00005013830.1, ENSCFET00005015452.1
    Conserved Domains (2) summary
    cl28912
    Location:49 → 239
    LGIC_ECD; extracellular domain (ECD) of Cys-loop neurotransmitter-gated ion channels (also known as ligand-gated ion channel (LGIC))
    pfam02932
    Location:247 → 474
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region
Nucleotide Protein
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