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ZSCAN25 zinc finger and SCAN domain containing 25 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102512223, updated on 10-Mar-2024

Summary

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Gene symbol
ZSCAN25
Gene description
zinc finger and SCAN domain containing 25
Locus tag
CB1_000055002
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See ZSCAN25 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
8
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 18 NC_045713.1 (7473219..7490849, complement)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210231.1 (28196..40958, complement)

Chromosome 18 - NC_045713.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 3A12 Neighboring gene dnaJ homolog subfamily B member 6-like Neighboring gene olfactory receptor 1F12 Neighboring gene transmembrane protein 225B Neighboring gene zinc finger protein 239-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequences of wild and domestic bactrian camels. Bactrian Camels Genome Sequencing and Analysis Consortium, et al. Nat Commun, 2012. PMID 23149746, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: zinc finger and SCAN domain-containing protein 25
Names
zinc finger protein 498

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045713.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    7473219..7490849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032459764.1 → XP_032315655.1  LOW QUALITY PROTEIN: zinc finger and SCAN domain-containing protein 25

    UniProtKB/TrEMBL
    A0A8B8REG8
    Conserved Domains (5) summary
    COG5048
    Location:321 → 506
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:435 → 455
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam02023
    Location:38 → 123
    SCAN; SCAN domain
    pfam13465
    Location:502 → 527
    zf-H2C2_2; Zinc-finger double domain
    cl02581
    Location:231 → 259
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
Nucleotide Protein
Heading Accession and Version

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