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SLC12A5 solute carrier family 12 member 5 [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102510238, updated on 10-Mar-2024

Summary

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Gene symbol
SLC12A5
Gene description
solute carrier family 12 member 5
Locus tag
CB1_001010016
See related
EnsemblRapid:ENSCFEG00005019477
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See SLC12A5 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
27
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 19 NC_045714.1 (2756955..2794080)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006211185.1 (226744..261800)

Chromosome 19 - NC_045714.1Genomic Context describing neighboring genes Neighboring gene phosphorylated CTD interacting factor 1 Neighboring gene zinc finger protein 335 Neighboring gene matrix metallopeptidase 9 Neighboring gene nuclear receptor coactivator 5 Neighboring gene transfer RNA valine (anticodon AAC) Neighboring gene CD40 molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables potassium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell volume homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 12 member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045714.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    2756955..2794080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014561753.2 → XP_014417239.2  solute carrier family 12 member 5 isoform X1

    UniProtKB/TrEMBL
    A0A8B7KDY9, S9WJS9
    Related
    ENSCFEP00005033151.1, ENSCFET00005036788.1
    Conserved Domains (1) summary
    TIGR00930
    Location:44 → 1139
    2a30; K-Cl cotransporter

  2. XM_032461277.1 → XP_032317168.1  solute carrier family 12 member 5 isoform X2

    UniProtKB/TrEMBL
    A0A8B8RGS9, S9WJS9
    Conserved Domains (1) summary
    TIGR00930
    Location:44 → 1134
    2a30; K-Cl cotransporter

  3. XM_032461279.1 → XP_032317170.1  solute carrier family 12 member 5 isoform X3

    UniProtKB/TrEMBL
    A0A8B8RIR2, S9WJS9
    Related
    ENSCFEP00005033212.1, ENSCFET00005036852.1
    Conserved Domains (1) summary
    TIGR00930
    Location:21 → 1116
    2a30; K-Cl cotransporter
Nucleotide Protein
Heading Accession and Version

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