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SGCA sarcoglycan alpha [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102507376, updated on 10-Mar-2024

Summary

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Gene symbol
SGCA
Gene description
sarcoglycan alpha
Locus tag
CB1_000176004
See related
EnsemblRapid:ENSCFEG00005022939
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See SGCA in Genome Data Viewer
Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) 16 NC_045711.1 (45917690..45931659)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006210352.1 (80549..94710, complement)

Chromosome 16 - NC_045711.1Genomic Context describing neighboring genes Neighboring gene sterile alpha motif domain containing 14 Neighboring gene protein phosphatase 1 regulatory subunit 9B Neighboring gene spermatid-specific linker histone H1-like protein Neighboring gene collagen type I alpha 1 chain Neighboring gene uncharacterized LOC116656836

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045711.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    45917690..45931659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006174942.3 → XP_006175004.2  alpha-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A8B6Y7H8, S9XL20
    Conserved Domains (1) summary
    pfam05510
    Location:27 → 354
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  2. XM_032457785.1 → XP_032313676.1  alpha-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0A8B8R6R4
    Conserved Domains (1) summary
    pfam05510
    Location:27 → 323
    Sarcoglycan_2; Sarcoglycan alpha/epsilon

  3. XM_014550817.2 → XP_014406303.2  alpha-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A8B6Y7H8, S9XL20
    Related
    ENSCFEP00005038718.1, ENSCFET00005042911.1
    Conserved Domains (1) summary
    pfam05510
    Location:27 → 354
    Sarcoglycan_2; Sarcoglycan alpha/epsilon
Nucleotide Protein
Heading Accession and Version

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