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EDA2R ectodysplasin A2 receptor [ Camelus ferus (Wild Bactrian camel) ]

Gene ID: 102505096, updated on 10-Mar-2024

Summary

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Gene symbol
EDA2R
Gene description
ectodysplasin A2 receptor
Locus tag
CB1_016804001
See related
EnsemblRapid:ENSCFEG00005011743
Gene type
protein coding
RefSeq status
MODEL
Organism
Camelus ferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
Orthologs
human mouse all
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Genomic context

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See EDA2R in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Annotation release Status Assembly Chr Location
102 current BCGSAC_Cfer_1.0 (GCF_009834535.1) X NC_045732.1 (5799891..5903182, complement)
101 previous assembly CB1 (GCF_000311805.1) Unplaced Scaffold NW_006214233.1 (9766..29008)

Chromosome X - NC_045732.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116661808 Neighboring gene hephaestin Neighboring gene uncharacterized LOC116662023 Neighboring gene uncharacterized LOC116661983 Neighboring gene ladinin-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequences of wild and domestic bactrian camels. Bactrian Camels Genome Sequencing and Analysis Consortium, et al. Nat Commun, 2012. PMID 23149746, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tumor necrosis factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of JNK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tumor necrosis factor-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor receptor superfamily member 27

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Camelus ferus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCGSAC_Cfer_1.0 Primary Assembly

Genomic

  1. NC_045732.1 Reference BCGSAC_Cfer_1.0 Primary Assembly

    Range
    5799891..5903182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032475164.1 → XP_032331055.1  tumor necrosis factor receptor superfamily member 27 isoform X1

    UniProtKB/TrEMBL
    A0A8B8SMI4, S9XBA7
    Related
    ENSCFEP00005019480.1, ENSCFET00005021704.1
    Conserved Domains (1) summary
    cd15838
    Location:8 → 123
    TNFRSF27; Tumor necrosis factor receptor superfamily member 27 (TNFRSF27), also known as ectodysplasin A2 receptor (EDA2R) or X-linked ectodermal dysplasia receptor (XEDAR)

  2. XM_032475167.1 → XP_032331058.1  tumor necrosis factor receptor superfamily member 27 isoform X2

    UniProtKB/TrEMBL
    A0A8B8SNN8, S9XBA7
    Related
    ENSCFEP00005019525.1, ENSCFET00005021749.1
    Conserved Domains (1) summary
    cd15838
    Location:3 → 118
    TNFRSF27; Tumor necrosis factor receptor superfamily member 27 (TNFRSF27), also known as ectodysplasin A2 receptor (EDA2R) or X-linked ectodermal dysplasia receptor (XEDAR)

  3. XM_032475165.1 → XP_032331056.1  tumor necrosis factor receptor superfamily member 27 isoform X1

    UniProtKB/TrEMBL
    A0A8B8SMI4, S9XBA7
    Conserved Domains (1) summary
    cd15838
    Location:8 → 123
    TNFRSF27; Tumor necrosis factor receptor superfamily member 27 (TNFRSF27), also known as ectodysplasin A2 receptor (EDA2R) or X-linked ectodermal dysplasia receptor (XEDAR)

  4. XM_032475166.1 → XP_032331057.1  tumor necrosis factor receptor superfamily member 27 isoform X2

    UniProtKB/TrEMBL
    A0A8B8SNN8, S9XBA7
    Conserved Domains (1) summary
    cd15838
    Location:3 → 118
    TNFRSF27; Tumor necrosis factor receptor superfamily member 27 (TNFRSF27), also known as ectodysplasin A2 receptor (EDA2R) or X-linked ectodermal dysplasia receptor (XEDAR)

  5. XM_032475163.1 → XP_032331054.1  tumor necrosis factor receptor superfamily member 27 isoform X1

    UniProtKB/TrEMBL
    A0A8B8SMI4, S9XBA7
    Conserved Domains (1) summary
    cd15838
    Location:8 → 123
    TNFRSF27; Tumor necrosis factor receptor superfamily member 27 (TNFRSF27), also known as ectodysplasin A2 receptor (EDA2R) or X-linked ectodermal dysplasia receptor (XEDAR)
Nucleotide Protein
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