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AAAS aladin WD repeat nucleoporin [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102499353, updated on 10-Mar-2024

Summary

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Gene symbol
AAAS
Gene description
aladin WD repeat nucleoporin
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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See AAAS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006206595.1 (230577..246204, complement)

NW_006206595.1Genomic Context describing neighboring genes Neighboring gene prefoldin subunit 5 Neighboring gene MYG1 exonuclease Neighboring gene Sp7 transcription factor Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene Sp1 transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006206595 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleocytoplasmic transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aladin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006206595.1 Reference TupChi_1.0

    Range
    230577..246204 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006169122.3 → XP_006169184.1  aladin

    Conserved Domains (3) summary
    COG2319
    Location:154 → 344
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:157 → 193
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:153 → 341
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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