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EOGT EGF domain specific O-linked N-acetylglucosamine transferase [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102499112, updated on 10-Mar-2024

Summary

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Gene symbol
EOGT
Gene description
EGF domain specific O-linked N-acetylglucosamine transferase
Locus tag
TREES_T100015279
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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See EOGT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006160205.1 (1442120..1489496)

NW_006160205.1Genomic Context describing neighboring genes Neighboring gene ubiquitin like modifier activating enzyme 3 Neighboring gene TATA element modulatory factor 1 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene V-type proton ATPase subunit G 1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006160205 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EGF domain-specific O-linked N-acetylglucosamine transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006160205.1 Reference TupChi_1.0

    Range
    1442120..1489496
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006160355.3 → XP_006160417.2  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X1

  2. XM_027776556.1 → XP_027632357.1  EGF domain-specific O-linked N-acetylglucosamine transferase isoform X2

    UniProtKB/TrEMBL
    L9J916
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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