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IGSF5 immunoglobulin superfamily member 5 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102494006, updated on 10-Mar-2024

Summary

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Gene symbol
IGSF5
Gene description
immunoglobulin superfamily member 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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See IGSF5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006160088.1 (341222..402674)

NW_006160088.1Genomic Context describing neighboring genes Neighboring gene U6 snRNA-associated Sm-like protein LSm5 pseudogene Neighboring gene secernin-3 pseudogene Neighboring gene Purkinje cell protein 4 Neighboring gene tripartite motif containing 42

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006160088 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
immunoglobulin superfamily member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006160088.1 Reference TupChi_1.0

    Range
    341222..402674
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006158165.3 → XP_006158227.1  immunoglobulin superfamily member 5 isoform X1

    Conserved Domains (2) summary
    smart00410
    Location:31 → 126
    IG_like; Immunoglobulin like
    pfam13927
    Location:132 → 203
    Ig_3; Immunoglobulin domain

  2. XM_006158166.3 → XP_006158228.1  immunoglobulin superfamily member 5 isoform X2

    Conserved Domains (2) summary
    smart00410
    Location:31 → 126
    IG_like; Immunoglobulin like
    pfam13927
    Location:132 → 203
    Ig_3; Immunoglobulin domain

  3. XM_006158167.3 → XP_006158229.1  immunoglobulin superfamily member 5 isoform X3

    Conserved Domains (3) summary
    smart00410
    Location:31 → 126
    IG_like; Immunoglobulin like
    pfam13927
    Location:132 → 203
    Ig_3; Immunoglobulin domain
    cl11960
    Location:31 → 115
    Ig; Immunoglobulin domain

  4. XM_006158168.3 → XP_006158230.1  immunoglobulin superfamily member 5 isoform X4

    Conserved Domains (2) summary
    smart00410
    Location:31 → 125
    IG_like; Immunoglobulin like
    cl11960
    Location:31 → 115
    Ig; Immunoglobulin domain
Nucleotide Protein
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