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ACSL3 acyl-CoA synthetase long chain family member 3 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102493984, updated on 10-Mar-2024

Summary

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Gene symbol
ACSL3
Gene description
acyl-CoA synthetase long chain family member 3
Locus tag
TREES_T100006021
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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See ACSL3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006208147.1 (508041..587554)

NW_006208147.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene programmed cell death protein 10 pseudogene Neighboring gene uncharacterized LOC114006487 Neighboring gene nuclease-sensitive element-binding protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006208147 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 3
Names
Long-chain-fatty-acid--CoA ligase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006208147.1 Reference TupChi_1.0

    Range
    508041..587554
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006170399.3 → XP_006170461.1  long-chain-fatty-acid--CoA ligase 3 isoform X1

    See identical proteins and their annotated locations for XP_006170461.1

    Conserved Domains (2) summary
    cd05927
    Location:130 → 717
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:30 → 717
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  2. XM_006170398.3 → XP_006170460.1  long-chain-fatty-acid--CoA ligase 3 isoform X1

    See identical proteins and their annotated locations for XP_006170460.1

    Conserved Domains (2) summary
    cd05927
    Location:130 → 717
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:30 → 717
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  3. XM_006170400.3 → XP_006170462.1  long-chain-fatty-acid--CoA ligase 3 isoform X1

    See identical proteins and their annotated locations for XP_006170462.1

    Conserved Domains (2) summary
    cd05927
    Location:130 → 717
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:30 → 717
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  4. XM_027769048.1 → XP_027624849.1  long-chain-fatty-acid--CoA ligase 3 isoform X2

    UniProtKB/TrEMBL
    L8Y0V0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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