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KIRREL2 kirre like nephrin family adhesion molecule 2 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102493438, updated on 10-Mar-2024

Summary

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Gene symbol
KIRREL2
Gene description
kirre like nephrin family adhesion molecule 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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See KIRREL2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006209766.1 (1641418..1649771)

NW_006209766.1Genomic Context describing neighboring genes Neighboring gene proline dehydrogenase 2 Neighboring gene NPHS1 adhesion molecule, nephrin Neighboring gene amyloid beta precursor like protein 1 Neighboring gene NFKB inhibitor delta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006209766 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: kin of IRRE-like protein 2
Names
kin of IRRE like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006209766.1 Reference TupChi_1.0

    Range
    1641418..1649771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006171666.2 → XP_006171728.1  LOW QUALITY PROTEIN: kin of IRRE-like protein 2

    Conserved Domains (5) summary
    smart00408
    Location:35 → 103
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:313 → 390
    IG_like; Immunoglobulin like
    pfam07679
    Location:123 → 221
    I-set; Immunoglobulin I-set domain
    pfam13927
    Location:223 → 290
    Ig_3; Immunoglobulin domain
    cl11960
    Location:392 → 496
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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