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ITPKC inositol-trisphosphate 3-kinase C [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102492052, updated on 10-Mar-2024

Summary

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Gene symbol
ITPKC
Gene description
inositol-trisphosphate 3-kinase C
Locus tag
TREES_T100020224
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See ITPKC in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159476.1 (1776519..1801323)

NW_006159476.1Genomic Context describing neighboring genes Neighboring gene latent transforming growth factor beta binding protein 4 Neighboring gene NUMB like, endocytic adaptor protein Neighboring gene ubiquitin-60S ribosomal protein L40 pseudogene Neighboring gene coenzyme Q8B Neighboring gene U6 spliceosomal RNA Neighboring gene actin maturation protease Neighboring gene small nuclear ribonucleoprotein polypeptide A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006159476 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol tetrakisphosphate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-1,4,5-trisphosphate 3-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol-trisphosphate 3-kinase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159476.1 Reference TupChi_1.0

    Range
    1776519..1801323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014588062.1 → XP_014443548.1  inositol-trisphosphate 3-kinase C

    UniProtKB/TrEMBL
    L9LBP7
    Conserved Domains (1) summary
    pfam03770
    Location:463 → 674
    IPK; Inositol polyphosphate kinase
Nucleotide Protein
Heading Accession and Version

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