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A4GALT alpha 1,4-galactosyltransferase (P1PK blood group) [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102482240, updated on 10-Mar-2024

Summary

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Gene symbol
A4GALT
Gene description
alpha 1,4-galactosyltransferase (P1PK blood group)
Locus tag
TREES_T100014031
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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See A4GALT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159781.1 (300163..334417)

NW_006159781.1Genomic Context describing neighboring genes Neighboring gene protein kinase C and casein kinase substrate in neurons 2 Neighboring gene ARF GTPase activating protein 3 Neighboring gene heterogeneous nuclear ribonucleoproteins A2/B1 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006159781 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
Lactosylceramide 4-alpha-galactosyltransferase
alpha 1,4-galactosyltransferase (P blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159781.1 Reference TupChi_1.0

    Range
    300163..334417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027772726.1 → XP_027628527.1  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    L9KP00

  2. XM_006150690.3 → XP_006150752.1  lactosylceramide 4-alpha-galactosyltransferase

    See identical proteins and their annotated locations for XP_006150752.1

    UniProtKB/TrEMBL
    L9KP00
    Conserved Domains (2) summary
    pfam04488
    Location:96 → 214
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:227 → 349
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
Nucleotide Protein
Heading Accession and Version

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