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MMADHC metabolism of cobalamin associated D [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102482020, updated on 10-Mar-2024

Summary

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Gene symbol
MMADHC
Gene description
metabolism of cobalamin associated D
Locus tag
TREES_T100017292
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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See MMADHC in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006160061.1 (4724489..4746216)

NW_006160061.1Genomic Context describing neighboring genes Neighboring gene prefoldin subunit 4 pseudogene Neighboring gene ubiquitin carboxyl-terminal hydrolase 16-like Neighboring gene uncharacterized LOC102483296 Neighboring gene U4 spliceosomal RNA Neighboring gene 26S proteasome regulatory subunit 4 pseudogene Neighboring gene LY6/PLAUR domain containing 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006160061 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sodium taurocholate cotransporting polypeptide is a functional receptor for human hepatitis B and D virus. Yan H, et al. Elife, 2012 Nov 13. PMID 23150796, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D protein, mitochondrial
Names
Methylmalonic aciduria and homocystinuria type D protein, mitochondrial
methylmalonic aciduria and homocystinuria, cblD type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006160061.1 Reference TupChi_1.0

    Range
    4724489..4746216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006157643.3 → XP_006157705.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X2

    UniProtKB/TrEMBL
    L9JF77
    Conserved Domains (1) summary
    pfam10229
    Location:83 → 323
    DUF2246; Uncharacterized conserved protein (DUF2246)

  2. XM_006157642.3 → XP_006157704.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X1

    UniProtKB/TrEMBL
    L9JF77
    Conserved Domains (1) summary
    pfam10229
    Location:83 → 352
    DUF2246; Uncharacterized conserved protein (DUF2246)

  3. XM_006157644.3 → XP_006157706.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X3

    UniProtKB/TrEMBL
    L9JF77
    Conserved Domains (1) summary
    pfam10229
    Location:24 → 293
    DUF2246; Uncharacterized conserved protein (DUF2246)

  4. XM_027775354.1 → XP_027631155.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X4

    UniProtKB/TrEMBL
    L9JF77
Nucleotide Protein
Heading Accession and Version

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