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LOC102480768 torsin-1A-interacting protein 2 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102480768, updated on 9-Nov-2023

Summary

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Gene symbol
LOC102480768
Gene description
torsin-1A-interacting protein 2
Locus tag
TREES_T100015777
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Also known as
TOR1AIP2
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Genomic context

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See LOC102480768 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159534.1 (1629761..1659526, complement)

NW_006159534.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 163 member A Neighboring gene uncharacterized LOC114005906 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene uncharacterized LOC102489971 Neighboring gene torsin 1A interacting protein 1 Neighboring gene PRELI domain containing protein 3B pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006159534 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2
Names
torsin A interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159534.1 Reference TupChi_1.0

    Range
    1629761..1659526 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006142303.3 → XP_006142365.1  torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    L9L7A1
    Conserved Domains (1) summary
    pfam05609
    Location:18 → 465
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_006142302.3 → XP_006142364.1  torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    L9L7A1
    Conserved Domains (1) summary
    pfam05609
    Location:18 → 465
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_014583929.2 → XP_014439415.1  torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    L9L7A1
    Conserved Domains (1) summary
    pfam05609
    Location:18 → 465
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
Heading Accession and Version

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