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FAR1 fatty acyl-CoA reductase 1 [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102474742, updated on 10-Mar-2024

Summary

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Gene symbol
FAR1
Gene description
fatty acyl-CoA reductase 1
Locus tag
TREES_T100011547
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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See FAR1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006159538.1 (4804091..4884821, complement)

NW_006159538.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinases regulatory subunit 1 pseudogene Neighboring gene acidic leucine-rich nuclear phosphoprotein 32 family member E pseudogene Neighboring gene parathyroid hormone Neighboring gene rab GDP dissociation inhibitor beta pseudogene Neighboring gene uncharacterized LOC106733989

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006159538 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alcohol-forming very long-chain fatty acyl-CoA reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acyl-CoA reductase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006159538.1 Reference TupChi_1.0

    Range
    4804091..4884821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006142535.3 → XP_006142597.2  fatty acyl-CoA reductase 1 isoform X3

    Conserved Domains (3) summary
    cd05236
    Location:17 → 336
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    PLN02996
    Location:8 → 452
    PLN02996; fatty acyl-CoA reductase
    pfam03015
    Location:363 → 453
    Sterile; Male sterility protein

  2. XM_014584752.2 → XP_014440238.1  fatty acyl-CoA reductase 1 isoform X5

    UniProtKB/TrEMBL
    L9L788
    Conserved Domains (3) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    PLN02996
    Location:2 → 446
    PLN02996; fatty acyl-CoA reductase
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

  3. XM_014584747.2 → XP_014440233.1  fatty acyl-CoA reductase 1 isoform X5

    UniProtKB/TrEMBL
    L9L788
    Conserved Domains (3) summary
    cd05236
    Location:11 → 330
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    PLN02996
    Location:2 → 446
    PLN02996; fatty acyl-CoA reductase
    pfam03015
    Location:357 → 447
    Sterile; Male sterility protein

  4. XM_027768699.1 → XP_027624500.1  fatty acyl-CoA reductase 1 isoform X5

    UniProtKB/TrEMBL
    L9L788

  5. XM_027768697.1 → XP_027624498.1  fatty acyl-CoA reductase 1 isoform X4

  6. XM_014584746.2 → XP_014440232.1  fatty acyl-CoA reductase 1 isoform X2

    Conserved Domains (3) summary
    cd05236
    Location:55 → 374
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    PLN02996
    Location:46 → 490
    PLN02996; fatty acyl-CoA reductase
    pfam03015
    Location:415 → 491
    Sterile; Male sterility protein

  7. XM_014584745.2 → XP_014440231.1  fatty acyl-CoA reductase 1 isoform X1

    Conserved Domains (3) summary
    cd05236
    Location:55 → 374
    FAR-N_SDR_e; fatty acyl CoA reductases (FARs), extended (e) SDRs
    PLN02996
    Location:46 → 490
    PLN02996; fatty acyl-CoA reductase
    pfam03015
    Location:401 → 491
    Sterile; Male sterility protein
Nucleotide Protein
Heading Accession and Version

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