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LCT lactase [ Tupaia chinensis (Chinese tree shrew) ]

Gene ID: 102470311, updated on 10-Mar-2024

Summary

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Gene symbol
LCT
Gene description
lactase
Locus tag
TREES_T100002331
Gene type
protein coding
RefSeq status
MODEL
Organism
Tupaia chinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Scandentia; Tupaiidae; Tupaia
Orthologs
human mouse all
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Genomic context

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See LCT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current TupChi_1.0 (GCF_000334495.1) Unplaced Scaffold NW_006207284.1 (2541526..2605699, complement)

NW_006207284.1Genomic Context describing neighboring genes Neighboring gene R3H domain containing 1 Neighboring gene nudC domain-containing protein 2-like Neighboring gene UBX domain protein 4 Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L36a-like Neighboring gene cytochrome c oxidase subunit 6C-like Neighboring gene 60S ribosomal protein L23a pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene minichromosome maintenance complex component 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006207284 Unplaced Scaffold Reference TupChi_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactase-phlorizin hydrolase
Names
Lactase-phlorizin hydrolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tupaia chinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TupChi_1.0

Genomic

  1. NW_006207284.1 Reference TupChi_1.0

    Range
    2541526..2605699 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006169722.2 → XP_006169784.1  lactase-phlorizin hydrolase

    UniProtKB/TrEMBL
    L8Y582
    Conserved Domains (2) summary
    pfam00232
    Location:901 → 1366
    Glyco_hydro_1; Glycosyl hydrolase family 1
    cl23725
    Location:81 → 219
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
Heading Accession and Version

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