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n-TYgta6 nuclear encoded tRNA tyrosine 6 (anticodon GTA) [ Mus musculus (house mouse) ]

Gene ID: 102467397, updated on 17-Aug-2024

Summary

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Official Symbol
n-TYgta6provided by MGI
Official Full Name
nuclear encoded tRNA tyrosine 6 (anticodon GTA)provided by MGI
Primary source
MGI:MGI:4414079
See related
AllianceGenome:MGI:4414079
Gene type
tRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
n-Ty6
Expression
Broad expression in CNS E11.5 (RPKM 6.5), limb E14.5 (RPKM 6.3) and 15 other tissues See more
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Genomic context

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See n-TYgta6 in Genome Data Viewer
Location:
13 A3.1; 13
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (23612908..23612996, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (23428738..23428826, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene nuclear encoded tRNA tyrosine 4 (anticodon GTA) Neighboring gene nuclear encoded tRNA tyrosine 5 (anticodon GTA) Neighboring gene RIKEN cDNA C230035I16 gene Neighboring gene STARR-positive B cell enhancer ABC_E5379 Neighboring gene nuclear encoded tRNA alanine 13 (anticodon AGC) Neighboring gene STARR-positive B cell enhancer ABC_E1871 Neighboring gene nuclear encoded tRNA tyrosine 7 (anticodon GTA)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Chan PP, et al. Nucleic Acids Res, 2009 Jan. PMID 18984615, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    23612908..23612996 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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