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MIR7854 microRNA 7854 [ Homo sapiens (human) ]

Gene ID: 102465840, updated on 10-Oct-2023

Summary

Official Symbol
MIR7854provided by HGNC
Official Full Name
microRNA 7854provided by HGNC
Primary source
HGNC:HGNC:50047
See related
Ensembl:ENSG00000277255 miRBase:MI0025524; AllianceGenome:HGNC:50047
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
hsa-mir-7854
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

Location:
16q23.2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (81533902..81533966)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (87594701..87594765)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (81567507..81567571)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene gigaxonin Neighboring gene ReSE screen-validated silencer GRCh37_chr16:81420479-81420673 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81430852-81431402 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81431403-81431953 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11179 Neighboring gene microRNA 4720 Neighboring gene Sharpr-MPRA regulatory region 12949 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81466113-81467024 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81467025-81467934 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81477254-81477786 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7756 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7757 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7759 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7758 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81479951-81480716 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81480717-81481480 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81482247-81483010 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11182 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81489297-81489981 Neighboring gene Sharpr-MPRA regulatory region 2768 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81491353-81492038 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81497377-81497916 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:81503436-81503936 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11183 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11184 Neighboring gene c-Maf inducing protein Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11185 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81527049-81527782 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81530785-81531426 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11187 Neighboring gene peptidylprolyl isomerase A pseudogene 51 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11188 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11189 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81546458-81547288 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81549519-81550168 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:81551802-81552499 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81553011-81553629 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:81565885-81566386 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:81566387-81566886 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81586378-81586984 Neighboring gene Sharpr-MPRA regulatory region 2593 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81615785-81616602 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:81626528-81627375 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:81625679-81626527 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11191 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:81649495-81650338 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:81650339-81651181 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:81652108-81652708 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11194 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7760 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 11195 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81660988-81661609 Neighboring gene uncharacterized LOC105371362 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81666826-81667665 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:81667666-81668506 Neighboring gene microRNA 6504 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:81678346-81679052 Neighboring gene Sharpr-MPRA regulatory region 7704

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_107008.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC092139
    Related
    ENST00000620068.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    81533902..81533966
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    87594701..87594765
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)