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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102463551, updated on 10-Mar-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Also known as
KIRREL
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005854040.1 (1165124..1233423)

NW_005854040.1Genomic Context describing neighboring genes Neighboring gene MINDY lysine 48 deubiquitinase 1 Neighboring gene uncharacterized LOC102463311 Neighboring gene CD48 antigen-like Neighboring gene SLAM family member 8-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005854040 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: kin of IRRE-like protein 1
Names
kin of IRRE like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005854040.1 Reference PelSin_1.0 Primary Assembly

    Range
    1165124..1233423
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025182758.1 → XP_025038543.1  LOW QUALITY PROTEIN: kin of IRRE-like protein 1

    Conserved Domains (5) summary
    cd05898
    Location:606 → 700
    Ig5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein (also known as Neph2)
    pfam13927
    Location:523 → 588
    Ig_3; Immunoglobulin domain
    cl11960
    Location:253 → 296
    Ig; Immunoglobulin domain
    cl26464
    Location:190 → 432
    Atrophin-1; Atrophin-1 family
    cl28434
    Location:76 → 157
    I-set; Immunoglobulin I-set domain
Nucleotide Protein
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