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LOC102462979 2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102462979, updated on 9-Nov-2023

Summary

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Gene symbol
LOC102462979
Gene description
2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
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Genomic context

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See LOC102462979 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005853191.1 (410312..419782)

NW_005853191.1Genomic Context describing neighboring genes Neighboring gene nucleolar and coiled-body phosphoprotein 1-like Neighboring gene nucleolar and coiled-body phosphoprotein 1 Neighboring gene elongation of very long chain fatty acids protein 6-like Neighboring gene paired like homeodomain 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005853191 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: 2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005853191.1 Reference PelSin_1.0 Primary Assembly

    Range
    410312..419782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014570068.1 → XP_014425554.1  LOW QUALITY PROTEIN: 2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like

    UniProtKB/TrEMBL
    K7GEQ5
    Conserved Domains (1) summary
    cl10013
    Location:39 → 437
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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