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TECTA tectorin alpha [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102462950, updated on 10-Mar-2024

Summary

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Gene symbol
TECTA
Gene description
tectorin alpha
See related
Ensembl:ENSPSIG00000011339
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See TECTA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005858167.1 (513287..597230, complement)

NW_005858167.1Genomic Context describing neighboring genes Neighboring gene G protein-activated inward rectifier potassium channel 4-like Neighboring gene zw10 kinetochore protein Neighboring gene uncharacterized LOC112547518 Neighboring gene tubulin folding cofactor E like Neighboring gene glutamate ionotropic receptor kainate type subunit 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005858167 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-tectorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005858167.1 Reference PelSin_1.0 Primary Assembly

    Range
    513287..597230 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025189890.1 → XP_025045675.1  alpha-tectorin

    UniProtKB/TrEMBL
    K7FXN3
    Related
    ENSPSIP00000012793.1, ENSPSIT00000012854.1
    Conserved Domains (9) summary
    smart00216
    Location:713 → 865
    VWD; von Willebrand factor (vWF) type D domain
    smart00241
    Location:1796 → 2050
    ZP; Zona pellucida (ZP) domain
    smart00539
    Location:98 → 254
    NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
    smart00832
    Location:517 → 592
    C8; This domain contains 8 conserved cysteine residues
    pfam00094
    Location:322 → 478
    VWD; von Willebrand factor type D domain
    pfam01826
    Location:597 → 650
    TIL; Trypsin Inhibitor like cysteine rich domain
    pfam08742
    Location:1303 → 1371
    C8; C8 domain
    pfam14670
    Location:2080 → 2112
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl17735
    Location:652 → 706
    VWC; von Willebrand factor type C domain
Nucleotide Protein
Heading Accession and Version

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