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LPGAT1 lysophosphatidylglycerol acyltransferase 1 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102462490, updated on 10-Mar-2024

Summary

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Gene symbol
LPGAT1
Gene description
lysophosphatidylglycerol acyltransferase 1
See related
Ensembl:ENSPSIG00000010707
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See LPGAT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005853319.1 (711213..868412)

NW_005853319.1Genomic Context describing neighboring genes Neighboring gene beaded filament structural protein 1 Neighboring gene proprotein convertase subtilisin/kexin type 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005853319 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-CoA:lysophosphatidylglycerol acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005853319.1 Reference PelSin_1.0 Primary Assembly

    Range
    711213..868412
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006116389.2 → XP_006116451.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    K7FUZ7
    Related
    ENSPSIP00000011857.1, ENSPSIT00000011914.1
    Conserved Domains (2) summary
    cd07990
    Location:69 → 285
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:274 → 329
    Acyltransf_C; Acyltransferase C-terminus

  2. XM_006116390.2 → XP_006116452.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X2

    Conserved Domains (1) summary
    cd07990
    Location:69 → 285
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like

  3. XM_006116391.2 → XP_006116453.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    K7FUZ7
    Conserved Domains (2) summary
    cd07990
    Location:69 → 253
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:242 → 297
    Acyltransf_C; Acyltransferase C-terminus
Nucleotide Protein
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