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ACSL1 acyl-CoA synthetase long chain family member 1 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102462443, updated on 10-Mar-2024

Summary

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Gene symbol
ACSL1
Gene description
acyl-CoA synthetase long chain family member 1
See related
Ensembl:ENSPSIG00000015828
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See ACSL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005856643.1 (6782620..6844939)

NW_005856643.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112546682 Neighboring gene helt bHLH transcription factor Neighboring gene caspase-3 Neighboring gene primase and DNA directed polymerase Neighboring gene protein CLEC16A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005856643 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005856643.1 Reference PelSin_1.0 Primary Assembly

    Range
    6782620..6844939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006128489.3 → XP_006128551.3  long-chain-fatty-acid--CoA ligase 1 isoform X1

    UniProtKB/TrEMBL
    K7GCK7, K7GCL6
    Related
    ENSPSIP00000018018.1, ENSPSIT00000018101.1
    Conserved Domains (1) summary
    cd05927
    Location:159 → 736
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_006128490.3 → XP_006128552.1  long-chain-fatty-acid--CoA ligase 1 isoform X2

    UniProtKB/TrEMBL
    K7GCL6
    Related
    ENSPSIP00000018027.1, ENSPSIT00000018110.1
    Conserved Domains (2) summary
    PLN02736
    Location:80 → 697
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:116 → 693
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
Nucleotide Protein
Heading Accession and Version

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