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PCYT1A phosphate cytidylyltransferase 1A, choline [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102460871, updated on 10-Mar-2024

Summary

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Gene symbol
PCYT1A
Gene description
phosphate cytidylyltransferase 1A, choline
See related
Ensembl:ENSPSIG00000002207
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See PCYT1A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005852016.1 (218176..247865)

NW_005852016.1Genomic Context describing neighboring genes Neighboring gene programmed cell death protein 1-like Neighboring gene dynein light chain Tctex-type 2B Neighboring gene solute carrier family 51 member A Neighboring gene uncharacterized LOC112547423 Neighboring gene probable palmitoyltransferase ZDHHC19

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005852016 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline-phosphate cytidylyltransferase A
Names
phosphate cytidylyltransferase 1, choline, alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005852016.1 Reference PelSin_1.0 Primary Assembly

    Range
    218176..247865
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014578403.2 → XP_014433889.1  choline-phosphate cytidylyltransferase A isoform X2

    UniProtKB/TrEMBL
    K7F2F7
    Conserved Domains (1) summary
    cd02174
    Location:130 → 279
    CCT; CTP:phosphocholine cytidylyltransferase

  2. XM_006112351.3 → XP_006112413.1  choline-phosphate cytidylyltransferase A isoform X1

    UniProtKB/TrEMBL
    K7F2F7
    Related
    ENSPSIP00000002217.1, ENSPSIT00000002224.1
    Conserved Domains (1) summary
    cd02174
    Location:75 → 224
    CCT; CTP:phosphocholine cytidylyltransferase
Nucleotide Protein
Heading Accession and Version

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