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GANAB glucosidase II alpha subunit [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102460258, updated on 10-Mar-2024

Summary

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Gene symbol
GANAB
Gene description
glucosidase II alpha subunit
See related
Ensembl:ENSPSIG00000015069
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See GANAB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005853743.1 (136253..151197)

NW_005853743.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C11orf98 homolog Neighboring gene integrator complex subunit 5 Neighboring gene beta-1,3-glucuronyltransferase 3 Neighboring gene transcriptional-regulating factor 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005853743 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glucan 1,3-alpha-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glucosidase II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: neutral alpha-glucosidase AB

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005853743.1 Reference PelSin_1.0 Primary Assembly

    Range
    136253..151197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006118228.2 → XP_006118290.2  LOW QUALITY PROTEIN: neutral alpha-glucosidase AB

    UniProtKB/TrEMBL
    K7G9U8
    Related
    ENSPSIP00000017059.1, ENSPSIT00000017137.1
    Conserved Domains (3) summary
    cd06603
    Location:393 → 860
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:260 → 393
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam01055
    Location:374 → 819
    Glyco_hydro_31; Glycosyl hydrolases family 31
Nucleotide Protein
Heading Accession and Version

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