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LPIN2 lipin 2 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102459696, updated on 10-Mar-2024

Summary

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Gene symbol
LPIN2
Gene description
lipin 2
See related
Ensembl:ENSPSIG00000005769
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See LPIN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005871031.1 (2662176..2745785)

NW_005871031.1Genomic Context describing neighboring genes Neighboring gene myosin regulatory light polypeptide 9 Neighboring gene myomesin 1 Neighboring gene elastin microfibril interfacer 2 Neighboring gene structural maintenance of chromosomes flexible hinge domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871031 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005871031.1 Reference PelSin_1.0 Primary Assembly

    Range
    2662176..2745785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006139030.3 → XP_006139092.1  phosphatidate phosphatase LPIN2 isoform X4

    See identical proteins and their annotated locations for XP_006139092.1

    UniProtKB/TrEMBL
    K7FE85
    Related
    ENSPSIP00000006345.1, ENSPSIT00000006382.1
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 106
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:634 → 859
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:466 → 556
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  2. XM_006139028.3 → XP_006139090.1  phosphatidate phosphatase LPIN2 isoform X2

    UniProtKB/TrEMBL
    K7FE85
    Conserved Domains (3) summary
    pfam04571
    Location:10 → 115
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:643 → 868
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:475 → 565
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  3. XM_014581526.2 → XP_014437012.1  phosphatidate phosphatase LPIN2 isoform X3

    UniProtKB/TrEMBL
    K7FE85
    Conserved Domains (3) summary
    pfam04571
    Location:33 → 138
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:666 → 862
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:498 → 588
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  4. XM_006139027.3 → XP_006139089.1  phosphatidate phosphatase LPIN2 isoform X1

    UniProtKB/TrEMBL
    K7FE85
    Conserved Domains (3) summary
    pfam04571
    Location:33 → 138
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:666 → 891
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:498 → 588
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  5. XM_006139029.3 → XP_006139091.1  phosphatidate phosphatase LPIN2 isoform X4

    See identical proteins and their annotated locations for XP_006139091.1

    UniProtKB/TrEMBL
    K7FE85
    Conserved Domains (3) summary
    pfam04571
    Location:1 → 106
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:634 → 859
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:466 → 556
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain
Nucleotide Protein
Heading Accession and Version

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