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CAT catalase [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102459642, updated on 10-Mar-2024

Summary

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Gene symbol
CAT
Gene description
catalase
See related
Ensembl:ENSPSIG00000007418
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See CAT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005855489.1 (353114..386464)

NW_005855489.1Genomic Context describing neighboring genes Neighboring gene N-acetyltransferase 10 Neighboring gene uncharacterized LOC112546020 Neighboring gene ankyrin repeat and BTB domain containing 2 Neighboring gene E74 like ETS transcription factor 5 Neighboring gene ETS homologous factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005855489 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hydrogen peroxide IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catalase
NP_001273863.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001286934.1 → NP_001273863.1  catalase

    See identical proteins and their annotated locations for NP_001273863.1

    Status: PROVISIONAL

    Source sequence(s)
    JX452102
    UniProtKB/TrEMBL
    J9QGW1, K7FJS2
    Related
    ENSPSIP00000008282.1, ENSPSIT00000008325.1
    Conserved Domains (2) summary
    cd08156
    Location:68 → 497
    catalase_clade_3; Clade 3 of the heme-binding enzyme catalase
    COG0753
    Location:26 → 500
    KatE; Catalase [Inorganic ion transport and metabolism]

RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005855489.1 Reference PelSin_1.0 Primary Assembly

    Range
    353114..386464
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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