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ACOT12 acyl-CoA thioesterase 12 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102459479, updated on 10-Mar-2024

Summary

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Gene symbol
ACOT12
Gene description
acyl-CoA thioesterase 12
See related
Ensembl:ENSPSIG00000015897
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See ACOT12 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005855481.1 (7771552..7824756, complement)

NW_005855481.1Genomic Context describing neighboring genes Neighboring gene creatine kinase, mitochondrial 2 Neighboring gene zinc finger CCHC-type containing 9 Neighboring gene single stranded DNA binding protein 2 Neighboring gene autophagy related 10 Neighboring gene uncharacterized LOC112546001

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005855481 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetyl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-coenzyme A thioesterase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005855481.1 Reference PelSin_1.0 Primary Assembly

    Range
    7771552..7824756 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006124366.3 → XP_006124428.1  acyl-coenzyme A thioesterase 12

    UniProtKB/TrEMBL
    K7GCE9
    Related
    ENSPSIP00000017960.1, ENSPSIT00000018043.1
    Conserved Domains (2) summary
    cd03442
    Location:162 → 282
    BFIT_BACH; Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, ...
    cl14643
    Location:292 → 525
    SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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