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A4GALT alpha 1,4-galactosyltransferase (P1PK blood group) [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102459009, updated on 10-Mar-2024

Summary

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Gene symbol
A4GALT
Gene description
alpha 1,4-galactosyltransferase (P1PK blood group)
See related
Ensembl:ENSPSIG00000001335
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See A4GALT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005856308.1 (2128369..2157027, complement)

NW_005856308.1Genomic Context describing neighboring genes Neighboring gene NADH-cytochrome b5 reductase 3 Neighboring gene RAB15 effector protein Neighboring gene poly(U)-specific endoribonuclease-like Neighboring gene uncharacterized LOC112546537 Neighboring gene ARF GTPase activating protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005856308 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase
Names
alpha 1,4-galactosyltransferase (P blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005856308.1 Reference PelSin_1.0 Primary Assembly

    Range
    2128369..2157027 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025187051.1 → XP_025042836.1  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    K7EZX3
    Related
    ENSPSIP00000001333.1, ENSPSIT00000001335.1
    Conserved Domains (2) summary
    pfam04572
    Location:231 → 353
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:95 → 218
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
Nucleotide Protein
Heading Accession and Version

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