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GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102455995, updated on 10-Mar-2024

Summary

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Gene symbol
GDPD5
Gene description
glycerophosphodiester phosphodiesterase domain containing 5
See related
Ensembl:ENSPSIG00000006747
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See GDPD5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005858160.1 (28068..173671)

NW_005858160.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 35 Neighboring gene involucrin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005858160 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerophosphodiester phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerophosphodiester phosphodiesterase domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005858160.1 Reference PelSin_1.0 Primary Assembly

    Range
    28068..173671
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014578801.2 → XP_014434287.2  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    K7FHG0
    Related
    ENSPSIP00000007470.1, ENSPSIT00000007511.1
    Conserved Domains (1) summary
    cl14615
    Location:148 → 502
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily

  2. XM_025189877.1 → XP_025045662.1  glycerophosphodiester phosphodiesterase domain-containing protein 5 isoform X2

    UniProtKB/TrEMBL
    K7FHF0, K7FHG0
    Related
    ENSPSIP00000007460.1, ENSPSIT00000007501.1
    Conserved Domains (1) summary
    cl14615
    Location:148 → 497
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
Nucleotide Protein
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