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B4GALT7 beta-1,4-galactosyltransferase 7 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102455627, updated on 10-Mar-2024

Summary

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Gene symbol
B4GALT7
Gene description
beta-1,4-galactosyltransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See B4GALT7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005854763.1 (1225246..1228304, complement)

NW_005854763.1Genomic Context describing neighboring genes Neighboring gene MGAT4 family member D Neighboring gene regulator of G-protein signaling 14-like Neighboring gene NEDD4 binding protein 3 Neighboring gene transmembrane p24 trafficking protein 9 Neighboring gene lectin, mannose binding 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005854763 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables xylosylprotein 4-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005854763.1 Reference PelSin_1.0 Primary Assembly

    Range
    1225246..1228304 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006121628.3 → XP_006121690.1  beta-1,4-galactosyltransferase 7 isoform X2

    Conserved Domains (1) summary
    cl11394
    Location:1 → 173
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_006121627.3 → XP_006121689.1  beta-1,4-galactosyltransferase 7 isoform X1

    Conserved Domains (1) summary
    cd00899
    Location:1 → 201
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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