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MGAT5B alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102454679, updated on 10-Mar-2024

Summary

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Gene symbol
MGAT5B
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
See related
Ensembl:ENSPSIG00000010409
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See MGAT5B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005858954.1 (80303..350505, complement)

NW_005858954.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112543512

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005858954 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005858954.1 Reference PelSin_1.0 Primary Assembly

    Range
    80303..350505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006135747.3 → XP_006135809.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X2

    UniProtKB/TrEMBL
    K7FUB5
    Conserved Domains (1) summary
    pfam15024
    Location:182 → 779
    Glyco_transf_18; Glycosyltransferase family 18

  2. XM_006135749.3 → XP_006135811.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X3

    UniProtKB/TrEMBL
    K7FUB5
    Conserved Domains (1) summary
    pfam15024
    Location:182 → 732
    Glyco_transf_18; Glycosyltransferase family 18

  3. XM_006135746.3 → XP_006135808.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X1

    UniProtKB/TrEMBL
    K7FUB5
    Conserved Domains (1) summary
    pfam15024
    Location:182 → 781
    Glyco_transf_18; Glycosyltransferase family 18

  4. XM_014579849.2 → XP_014435335.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X4

    UniProtKB/TrEMBL
    K7FUB5
    Related
    ENSPSIP00000011625.1, ENSPSIT00000011682.1
    Conserved Domains (1) summary
    pfam15024
    Location:121 → 720
    Glyco_transf_18; Glycosyltransferase family 18

  5. XM_025177786.1 → XP_025033571.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X5

    Conserved Domains (1) summary
    pfam15024
    Location:182 → 619
    Glyco_transf_18; Glycosyltransferase family 18
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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