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ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102453544, updated on 10-Mar-2024

Summary

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Gene symbol
ST3GAL5
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 5
See related
Ensembl:ENSPSIG00000009525
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See ST3GAL5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005851770.1 (1268668..1300270)

NW_005851770.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase I subunit A Neighboring gene uncharacterized LOC106732188 Neighboring gene fibroblast growth factor receptor like 1 Neighboring gene uncharacterized LOC106732166

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005851770 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lactosylceramide alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005851770.1 Reference PelSin_1.0 Primary Assembly

    Range
    1268668..1300270
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006111632.3 → XP_006111694.1  lactosylceramide alpha-2,3-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    K7FR57
    Related
    ENSPSIP00000010517.1, ENSPSIT00000010570.1
    Conserved Domains (1) summary
    pfam00777
    Location:89 → 357
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_006111631.3 → XP_006111693.1  lactosylceramide alpha-2,3-sialyltransferase isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:112 → 380
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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