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CERS5 ceramide synthase 5 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102452005, updated on 10-Mar-2024

Summary

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Gene symbol
CERS5
Gene description
ceramide synthase 5
See related
Ensembl:ENSPSIG00000014728
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See CERS5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005857381.1 (924162..972236, complement)

NW_005857381.1Genomic Context describing neighboring genes Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit D1 Neighboring gene glycerol-3-phosphate dehydrogenase 1 Neighboring gene uncharacterized LOC106732567 Neighboring gene LIM domain and actin binding 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005857381 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005857381.1 Reference PelSin_1.0 Primary Assembly

    Range
    924162..972236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006131149.3 → XP_006131211.2  ceramide synthase 5

    UniProtKB/TrEMBL
    K7G8N9
    Related
    ENSPSIP00000016650.1, ENSPSIT00000016726.1
    Conserved Domains (2) summary
    cd00086
    Location:145 → 192
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:196 → 389
    TRAM_LAG1_CLN8; TLC domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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