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LGALS9 galectin 9 [ Pelodiscus sinensis (Chinese soft-shelled turtle) ]

Gene ID: 102451571, updated on 10-Mar-2024

Summary

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Gene symbol
LGALS9
Gene description
galectin 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Pelodiscus sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Trionychia; Trionychidae; Pelodiscus
Orthologs
human mouse all
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Genomic context

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See LGALS9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current PelSin_1.0 (GCF_000230535.1) Unplaced Scaffold NW_005871025.1 (2635041..2650370, complement)

NW_005871025.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene LYR motif containing 9 Neighboring gene nitric oxide synthase 2 Neighboring gene uncharacterized LOC112543957 Neighboring gene uncharacterized LOC106733036

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871025 Unplaced Scaffold Reference PelSin_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactoside binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of CD4-positive, alpha-beta T cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of type II interferon production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galectin-9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pelodiscus sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PelSin_1.0 Primary Assembly

Genomic

  1. NW_005871025.1 Reference PelSin_1.0 Primary Assembly

    Range
    2635041..2650370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014581406.2 → XP_014436892.1  galectin-9

    Conserved Domains (1) summary
    smart00908
    Location:145 → 266
    Gal-bind_lectin; Galactoside-binding lectin
Nucleotide Protein
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